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A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different …

… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and detected the virus in 34 …

… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …

Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse … gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … “Distribution of predominant high-temperature archaeal and bacterial lineages in Yellowstone National Park,” as well as …

Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … metabolite standards, and development of high-throughput untargeted analysis pipelines.  Beyond profiling over 10k … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

Dr. Cole is interested in studying how plants interact with their … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Education … Selected Publications … Software …

Research in the Analysis R&D group focuses on developing new … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … the Wang group has developed customized data analyses and software to enable “grand-scale” scientific projects. These … metagenome binning software … Education … Selected Publications … Software …

Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back … human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …

Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …