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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The … is known about the impacts of these infections on ecosystem functions. As part of efforts to characterize global … multiple user facilities stewarded by the DOE’s Office of Biological and Environmental Research in one proposed …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … with a powerful addition to their toolkit to study gene function. As a demonstration, the researchers used … within a lab environment, shining a light into this “biological dark matter.”  It also offers CRISPR a point of …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample … The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Cultivating Symbiotic Antarctic Microbes
… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global … Summary Symbiotic relationships are long-term biological interactions between one or more biological …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work … impactful scientific discoveries, supporting the DOE’s Biological and Environmental Research user community in … T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and metabolite atlases. … Google Scholar. … Education … Awards and Honors … Selected Publications …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and decomposition is … two programs within different Divisions of the Office of Biological and Environmental Research, the Joint Genome …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … distachyon pan-genome correlates with population structure. Nat. Comm. 8(1), 2184 doi: … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here … to help develop the JGI’s community outreach efforts with diversity, equity and inclusion in mind. Microbiome … overcome common user bottlenecks in access, analysis and sharing of JGI-generated data. She is also interested in …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … Oak Ridge, Tennessee. Recently, Lawrence, in collaboration with researchers from ORNL, Lawrence Berkeley National … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Learning to Look
Machine learning approach significantly expands inovirus … genes,” he said. “If these genes are similar in size and function to those in typical bacterial or archaeal genomes, … proteins, many linked to key functions such as virion structure and extrusion, and DNA replication and …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … root cells. The fungus is almost always found among and within poplar trees, and in an effort to understand its … Ridge National Laboratory (ORNL) sponsored by the Office of Biological and Environmental Research at the United States …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida …
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