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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Spatial Homogeneity of Bacterial Communities Associated with the Surface Mucus Layer of the Reef-Building Coral Acropora palmata
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Eric Olo Ndela
Eric’s research is focusing on the development of new computational approaches to identify and characterize novel Mobile Genetic Elements. Eric’s GitHub …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the … trichocarpa ) trees, as well as the soil surrounding their roots (known as the rhizosphere), researchers hope this … data set will help identify how different elements of the ecosystem interact and respond to changes in the …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi … up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom spatially-resolved …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi … up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom spatially-resolved …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … microbes are and what they do—can help researchers develop predictive watershed scale models to manage river …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … . Summary Arbuscular mycorrhizal fungi, the most widespread type of mycorrhizal fungi, live within a plant’s root …
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Building Sphagnum Genomic Resources
Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … traits in sphagnum growth and decomposition is critical to predicting the ecosystem response to climate change. Through … recovering draft metagenome-assembled genomes for seven novel species of Acidobacteria through an approved CSP …
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Identification of Cellulose-Responsive Bacterial and Fungal Communities in Geographically and Edaphically Different Soils by Using Stable Isotope Probing
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Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores
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The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
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