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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements metagenomics studies. The Science … of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … Kyrpides , Biology & Biochemistry category Computational Genomics Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced … skills as well as build their network in the field of genomics and scientific research. The topics students worked on ranged far and wide — from implementing new data visualization tools, to using natural language …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Laboratory, are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature … metabolism . And postdoctoral researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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