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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Science. His group is developing novel methods for enabling large-scale comparative analysis, as well as mining and … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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Hiroshi Otani
… the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … subspecies variegata genomes allowed researchers to study the conservation and evolution of the genes … a DOE Office of Science User Facility, revealed the largest number of TPS genes of any currently sequenced …
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Robert Bowers
… uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This includes studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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VEGA Symposium
… campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” … uncultivated viral diversity, understand the role of viruses in natural ecosystems, and functionally explore … for students and researchers in the viral ecogenomics field to exchange ideas with experts in the field, as well …
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Silver age of GOLD introduces new features
… follows community standards freely available, and enabling large-scale comparative genomics analysis initiatives. GOLD not … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked … U.S. Department of Energy Joint Genome Institute …
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Back to the Future! A Sorghum Story
… specifically to turn their biomass into sustainable biofuel and bioproducts. John Mullet, a biologist at Texas A&M …
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Protocol for condition-dependent metabolite yield prediction using the TRIMER pipeline
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Georg Rath
… Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, Vienna) and the High Field MRI Centre in Vienna, where he first stumbled from …
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . By contrast, … and  I. europaea  genomes sequenced and annotated for this study. The team found that, unlike pathogenic or mycorrhizal …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… for mapping these RNA reads. “Currently, this is the largest JGI-sequenced fungal metatranscriptome yet,” said … Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples from four sites: … proposal that Martin submitted in 2012. At that time, the field had surveyed many different soil communities for …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … To get to that point, industrial facilities will need large-scale approaches to processing plant biomass. Here, …
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