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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There … for breaking down biomass use aerobic methods (those using oxygen) to remove lignin and transform the remaining … Office of Biological and Environmental Research of the U.S. Department of Energy grant DE-SC0020420 (MAO), Institute for …
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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial … for carrying CRISPR into microorganisms. CRAGE (Chassis-independent Recombinase-Assisted Genome Engineering) is a … By employing CRAGE, researchers are no longer limited to using model host microbes; theoretically, any microbe can …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and … been able to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like … microbial cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. The Impact The number of microbes in, on, and …
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Building Wet and Dry Lab Skills
… 2025 marked the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research … the plants to harvesting the plants and extracting DNA. They also analyzed 16s amplicon data to determine … lab. We've been focused on analyzing plant microbiome data using different programming languages such as Python, Bash, …
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Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.
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Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)
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Genome sequence and description of the anaerobic lignin-degrading bacterium Tolumonas lignolytica sp. nov.
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Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica.
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of … isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in … was done through the JGI Community Science Program . Using an ecology metric called beta diversity, the team …
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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
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