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The Power of One, Amplified
… approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … remain unknown. In recent years, advances in sequencing technologies and bioinformatic tools have helped decode the … diversity across thousands of samples. Metagenomics is currently being applied across tens to hundreds of samples, …
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JGI & KBase at PAG XXVII
… collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … and Environmental Research (BER) Plant Genomic Science on current and ongoing developments toward integrative biology. …
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BBMerge – Accurate paired shotgun read merging via overlap
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Complete genome sequence of Meiothermus silvanus type strain (VI-R2T)
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The fungus that made itself at home
… new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have gained … rot ( Serpula lacrymans ) is so destructive in houses. A study involving six brown rot fungi reveals the genomic … plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … microbial mats at Yellowstone offer researchers an analog for studying early Earth conditions. Additionally, … Experiment Station (W.P.I.). Computations were performed on the Hyalite High-Performance Computing System, …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces … Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of … methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes and …
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Divergent cytosine DNA methylation patterns in single‐cell, soybean root hairs
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Generation of Long Insert Pairs Using a Cre-LoxP Inverse PCR Approach
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Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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