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… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, … (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and …

RIViT-seq technology could speed up associating transcription … with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … of regulon identification by in vitro transcription-sequencing (RIViT-seq) to facilitate the characterization of …

In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both …   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein …

… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … whole complex of progenitors and descendant species and, consequently, the evolution of polyploidy.” Evaluating … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

And it made me explore every single possibility. And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … are a little bit stronger in computing, so I was kind of worried coming into the, the internship that maybe I …

… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, metabolomics and data analyses … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … for multiple applications.       Despite advances in sequencing technologies and computational methods in the … under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and …

… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior … (1996) … List available on Google Scholar … Education … Publications …

… where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

… emerging single-cell characterization technologies (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …