Large-scale contamination of microbial isolate genomes by Illumina PhiX control
Results
Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
DOE JGI Metagenome Workflow
Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
Information theory and machine learning illuminate large‐scale metabolomic responses of Brachypodium distachyon to environmental change
Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
Systems-wide analysis revealed shared and unique responses to moderate and acute high temperatures in the green alga Chlamydomonas reinhardtii
IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes
Tackling soil diversity with the assembly of large, complex metagenomes
Prepublication data sharing
Bipartite graphs in systems biology and medicine: a survey of methods and applications