The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
Comparative genomics and physiology of the genus Methanohalophilus, a prevalent methanogen in hydraulically fractured shale
Comparative genomics of clinical and environmental Vibrio mimicus
Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
Defining the Boundaries and Characterizing the Landscape of Functional Genome Expression in Vascular Tissues of Populus using Shotgun Proteomics
Chapter Twelve Genomics for Key Players in the N Cycle From Guinea Pigs to the Next Frontier
Unraveling the functional dark matter through global metagenomics
Synthase-Selective Exploration of a Tunicate Microbiome by Activity-Guided Single-Cell Genomics
Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
Leveraging single-cell genomics to expand the fungal tree of life
Comparative genomics of the extremophile Cryomyces antarcticus and other psychrophilic Dothideomycetes