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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Meeting Code of Conduct
… All participants and staff of JGI events are required to adhere to the following Code of …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar …
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Promoting the Power of Viral Metagenomics
… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since …
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Virus-Microbe Interactions of Mud Island Mangroves
… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program , which … or national user facilities. Baker had worked with the JGI through a Community Science Program (CSP) proposal, and …
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Tracking the Origins of Methane-Producing Microbes
… published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the Emerging …
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Georg Rath
… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  Brachypodium  grasses have …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… internship experiences have influenced their careers in science. Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … school.  The interns from this cohort and their respective JGI mentors are: Ruoxi Zhao and mentor Margot Bezrutczyk …
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Supporting Global Research into Actinomycetes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a member of  its Secondary Metabolites research group . That group, led by JGI Director Nigel Mouncey, has launched its  Secondary … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Building Wet and Dry Lab Skills
… on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running … Alabama A&M majoring in Biology, and I'm also an intern at JGI with Yi and Sharon. Yi Zhai : Hi, everyone. My name is … how to run Dori, which is a compute cluster owned by JGI, and used Jupyter notebook for a programming environment …
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Boosting Small Molecule Production in Super “Soup”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … paper is the first result of the collaboration with the JGI, where they are partnering with Yasuo Yoshikuni and Ian …
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