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Graduate Students Get Thesis Research Opportunity at the JGI
Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered environments … plans to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio Two special …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell wall materials …
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Year in Review: JGI’s 2018 Progress Report Available Now
… highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, … arsenic mobility and to better understand their roles in the global sulfur cycle. Copies are available online – …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant world …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … plants outside of their native habitat or cold hardiness zones, they have different levels of performance,” Juenger …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the side of the road to collect small weedy …
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JGI on the 2020 Highly Cited Researchers List
… those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by citations for field and year in the Web of … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos Kyrpides and  Simon Roux are part of …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer …
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