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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
A special issue of Synthetic Biology celebrates research enabled by … Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. But not all …
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When “The Blob” Made It Hotter Under the Water
… marine microbes and by extension, the ocean’s capacity to act as a carbon sink. Summary As global temperatures rise, so do instances of extreme weather events such as … up and down the water column. They recently shared their findings in Communications Biology . They reported that the …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved … to core nitrogen metabolism, this team built a phylogenetic tree using bioinformatic software called FastTree … separately for billions of years have some common signatures of muli-substrate specificity. However, different …
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Drought responsive gene expression regulatory divergence between upland and lowland ecotypes of a perennial C4 grass
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the … generating their  genome sequences to improve breeding by genetic improvements. Apomixis is asexual reproduction … publicly available data relevant to DOE interests in finding solutions to energy and environmental challenges, …
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JGI@25: Studying Sorghum’s Survival Skills
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … reference genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 … each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in Sorghum (EPICON) …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their … explanation, according to the authors, lies in their finding that each lichen partner can sexually reproduce: genetic recombination during sex could increase the fitness …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
JGI pilot project with fledgling Florida high school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US Department of …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a … factors that initiate transcription in bacteria. Using this technology, which combines an in vitro transcription … complex as well as a sigma factor. While all bacteria encode at least one principal sigma factor responsible for …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the … in many impactful papers in recent years, but are also looking forward to jointly expanding into new areas of …
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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
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Faunimonas pinastri gen. nov., sp. nov., an endophyte from a pine tree of the family Pleomorphomonadaceae, class Alphaproteobacteria
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