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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life sciences that can be … future HPC systems – our data and compute challenges aren’t getting any smaller and we need to keep pace with changes in …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton … growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges. Maximizing soybean yield is critical to energy independence in the U.S. Not only does it pair … … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … Science user facility at Lawrence Berkeley National Laboratory (Berkeley Lab), is to become the leading integrative …
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Training the Next Generation of Talent
DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … was back on campus at the University of California, Merced to start orientation as a first-year graduate student in the … lab, he also took a long view of the opportunity. “I’m getting a picture of the amount of data that’s going to be …
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NeLLi — Symposium on New Lineages of Life
… hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the …
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An Integrated Dataset to Understand Ecosystem Interaction
… poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how … data set will help identify how different elements of the ecosystem interact and respond to changes in the … studied by researchers came from two environments: natural forests and plantations managed through human intervention. …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … of these methanogenic microorganisms was narrowed to a type of archaea called  Euryarchaeota . These ancient, …
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