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Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of … is wild,” and admitting, “friends give me a hard time for that.” But the title brought him back to his first … just a collection of some of the folks, who’ve been pushing forward these techniques and, and making all kinds of super …
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Introducing New Members of the JGI User Executive Committee
… of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies … He also wants to assist JGI in extending its activity-based cell sorting pipelines to further the link between cellular … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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Better Genome Editing for Bioenergy
… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … , a team of researchers likewise honed their tool before felling their research problem: at a genetic level, how … lead Cas9 to make a lethal double-strand DNA break, a dysfunctional sgRNA would be harmless. The team was thus able …
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New and Improved: Eucalyptus Reference is Now Accessible
… improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | … with GENESPACE, a computational tool for comparative genomics.   With a more robust reference genome, researchers …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… DOE RENEW grant initiative when school starts in the fall.  Outside of the technical aspect of her project, Hour mentioned that she had gained knowledge in bioinformatics and machine learning. “Also,” she added, ”I’ve developed efficient skills in working with high performance computing and had an amazing opportunity to …
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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Picking Up Threads of Cotton Genomics
… , both faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new … crops. Additionally, cotton is almost entirely made up of cellulose and it is a fiber model to understand the molecular development of cellulose. Cotton Genomes on Phytozome The genomes of all …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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Mining Metagenomes for Cas Proteins
… characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the … led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also affiliated with … and Nanohaloarchaea. This work represents an excellent showcase of the unique capabilities provided from …
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