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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes …
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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes
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Prokaryote Program User Advisory Committee
The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on … and scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs’ management teams on how to …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… is a look at how researchers get these specialized snapshots of a freshwater ecosystem. …
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Outreach Stories
Interested in reading more JGI intern and mentor success stories? Read more below. …
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Chomping Toward Better Plastic Recycling
… all kinds of things about plastic – except, how to break it down for recycling. But some hungry insects can digest plastic. So researchers are taking a look at how these critters process plastic, to improve plastic recycling by …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the … biological and environmental samples in support of user science.  Capabilities offered by the platform are a result …
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology …
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Back to the Future! A Sorghum Story
You might know sorghum as an edible grain. But there are some sorghum varieties, grown on marginal land with little water, which were developed specifically to turn their …
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Accelerating Metagenomics Discoveries with Deep Learning
… a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Analysis of Plant Pan-Genomes and Transcriptomes with GET_HOMOLOGUES-EST, a Clustering Solution for Sequences of the Same Species
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