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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … ecosystem works. When she set out to analyze 500 metagenomes from this sample set through the Community Science …
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral … binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in …
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A Plant Root Atlas for Tracking Developmental Trajectories
… , a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship program, …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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A Step Toward Controlling Soybean Rust
… reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Triggering Morel Fruiting
… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it …
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