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Insights into the action of phylogenetically diverse microbial expansins on the structure of cellulose microfibrils
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Genomic prediction of switchgrass winter survivorship across diverse lowland populations
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Speciation Underpinned by Unexpected Molecular Diversity in the Mycorrhizal Fungal Genus Pisolithus
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Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
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High-density CRISPRi screens reveal diverse routes to improved acclimation in cyanobacteria.
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Metabolic capacity is maintained despite shifts in microbial diversity in estuary sediments
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SPRUCE-ing Up Science
… in his backyard. Originally from northern California and one of the first students to participate in the DOE Joint … into the world of evolutionary biology. And around that time, a collaborative internship program between the JGI and … New Phytol. 2022 Jun;234(6):2111-2125. doi: 10.1111/nph.18072.   Byline: Ashleigh Papp …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment with … with: Until they came up with this new method, Session mentioned that the analysis for determining the evolutionary … strawberries you find at the market.” Session credited his time with Rokhsar (both during and after his time at the …
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Fungal Friends or Foes in Plant Roots
… They play key roles in maintaining the plant’s health and diversity, which can in turn boost yields for both food and … plants (endophytes). These include genes that degrade plant cell walls and break down plant sugars. The results also … colonize roots by degrading the plant cell wall component pectin. The results therefore predicted that these …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to … Check out the short videos highlighting the exciting work done by the 2020 cohort of JGI-UC Merced interns .   by: …
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JGI@25: Solving the Mystery of the Missing Oil
… Ridge National Laboratory Governor’s Chair, noted that one of the biggest questions was the mystery of the missing … at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed … identification of a new “oil-seeking” species related to Oceanospirillales , work that also involved Janet Jansson’s …
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How to Target a Microbial Needle within a Community Haystack
… developed, tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then … would allow researchers to focus on specific microbes within metagenome samples and associate their sequences with … (HCR-FISH). In contrast to standard FISH where a one probe adds one fluorescent molecule when bound to a …
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