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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, … on the scientific questions asked and whether they are within DOE mission areas of bioenergy, carbon cycling, and …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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Three Join the JGI User Executive Committee
… of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full roster of members. … cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI on five …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … unconventional sample types such as low-biomass samples and host-associated holobionts. She is also interested in … As a UEC member, he aims to help the JGI improve its interactions with the broader user and scientific community …
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Covariation of hot spring geochemistry with microbial genomic diversity, function, and evolution
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Transcription Factor Amr1 Induces Melanin Biosynthesis and Suppresses Virulence in Alternaria brassicicola
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Partnerships: Myco-Ed
… Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data … Beyond providing a scalable solution for production of high-quality …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … publishing  the results in  Molecular Plant-Microbe Interactions . The results were striking. Adding PM193 … This work was supported by the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory …
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Defining a Pan-Genome for Antarctic Archaea
… occur in response to viral infections and are important for virus-host interactions. Analysis of strain variation showed that … 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers … into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director Nigel … — a proof-of-principle for investigating plant-microbe interactions. A final recent advance in CRAGE is the …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … gene expression in that set, implicated in AMF interactions, was dramatically reduced as a result of … This research was funded in part by DOE Grant DE-SC0014081 (to N.V., B.C., C.G., …
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Coordinating Environmental Genomics and Geochemistry Reveals Metabolic Transitions in a Hot Spring Ecosystem
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