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Back in the Lab: the 2023 Summer Intern Experience
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FICUS-NERSC/KBASE
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Fishing for Novel Cellulose Degraders
… To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, … form of functional enrichment leading to the sequencing of genomes from either individual cells or consortia of cells,” … program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been … predicted functional and metabolic roles across global metagenomes (within IMG).  The Impact The initial analysis … environmental conditions can be estimated. In short, the complexity of nutrients, constraints, etc. of natural …
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Virus-Microbe Interactions of Mud Island Mangroves
… worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The purpose of this CSP is to better understand methane cycling in mangrove … “In terms of my project, I wanted to incorporate that CSP, but also look at how viruses might be influencing the …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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2022 Progress Report
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Workforce Development & Education Outreach
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