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Genome Insider
… showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear … the superpowers encoded in plants, fungi, microalgae, environmental viruses, and bacteria to contribute to a more sustainable world. Learn about …
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Informatics Advisory Committee
IAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) activities and strategic plan. The IAC … and Deputies. The IAC does not perform management functions, nor does it direct the JGI CIO or the JGI Director on …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … and replicating with their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, … on culturing virus and host pairs in the laboratory to study their interactions. This work,  recently published in  …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and …
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2024 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. … algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our user community …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer to … the chemicals that make species unique and different from one another. They are incredibly important to medicine, the …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can thrive in the soil as … and  I. europaea  genomes sequenced and annotated for this study. The team found that, unlike pathogenic or mycorrhizal …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … categories: Catalog the human virome; Develop tools to study the human virome; Explore how the human virome … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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Awakening the Sleeping Carboxylase Function of Enzymes: Engineering the Natural CO2‑Binding Potential of Reductases
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Waiting to Respire
… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … The research teams opted to collaborate on a single study, with Matheus Carnevali and Schulz sharing co-first …
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JGI User Executive Committee Expands
… of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the … Center, Sundy Maurice of the University of Oslo, Aaron Robinson of Los Alamos National Laboratory, Rebecca Smith … Along with the existing UEC members, their areas of study span the research interests of the JGI’s user …
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