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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — … genomics and metagenomics of the microbiology-focused groups at the Joint Genome Institute, it is fantastic that … was triggered by a talk. Woyke was invited to present her work in London in December 2018 at a Symposium at the Royal …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
DNA sequences that code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating … was  recently reported in Nature Communications. The work was co-led by Victoria Turzynski in Alexander Probst’s … in the samples that corresponded to eight separate groups of viruses. To visualize one particular viral genome in …
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Bacterial Microcompartments
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek … Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the …
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JGI on the 2021 Highly Cited Researchers List
… among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields … during the last decade.” Approximately 6,600 researchers working in 21 fields appear on the list, and those from the … Santa Barbara, he and his colleagues found that anaerobic fungi from herbivore poop might be a new source of novel …
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High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism
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JGI User Executive Committee Expands
… at the Donald Danforth Plant Science Center, where his group focuses on interactions underlying plant adaptation in … in fungal genetics and evolution, he helps manage the Bacterial-Fungal Interactions Science Focus Area. He has … cell wall to address dairy sustainability challenges. She’s worked with the JGI on poplar and sorghum projects, …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … in various combinations and cloned into a vector of choice; up to 210,000 variants can be made Pool of variant … quarter. In general, projects that do not require any rework will have the fastest cycle times, so please ensure …
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Uncovering Novel Genomes from Earth’s Microbiomes
… samples around the world, expanding the known diversity of bacteria and archaea by 44%, is now available and  described … as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a collaboration involving more than 200 … scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out from previous …
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Nikos Kyrpides
… with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling large-scale … Roux S. et al. 2019. Cryptic inoviruses are pervasive in bacteria and archaea across Earth’s biomes. Nature … INRA, France; A Knowledge-Based Bioinformatics Framework for Microbial Pathway Genomics (MICROME); Metagenomics …
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Bacterial Genome Annotation
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A bacterial toolkit for plants
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