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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Metagenomes from Experimental Hydrologic Manipulation of Restored Coastal Plain Wetland Soils (Tyrell County, North Carolina)
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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An Addiction Crucial to a Fungus’ Reproduction
… researchers investigated the role that bacteria living within a host (endosymbionts) have on fungal host … JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As … pathways in several branches of the fungal kingdom, generating the first transcriptomic dataset of sexual …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… are bacteria that act like tiny natural engineers with special skills to break down pollutants and recycle … Chloroflexota lost when they returned to an ocean home. A deeper understanding of how these bacteria evolved could … study published in  The ISME Journal     focused on a class within  Chloroflexota called  Dehalococcoidia . Some  …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close … of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head … composition and metabolism, work on which she is expanding with her study of microbes in California’s manmade water …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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