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How Microbes Can Protect Plants in Drier Straits
… was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its … evolved from a parasitic interaction with their soil fungus host, Rhizopus microsporus . Researchers found that … and a part of the oil-producing Mucoromycotina group, about which little is known. The Cornell team cultivated and …
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A Step Toward Controlling Soybean Rust
… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) … of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the French …
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Virus-Microbe Interactions of Mud Island Mangroves
… student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research … the DOE Office of Science Graduate Student Research (SCGSR) program , which awards graduate students the opportunity to … at one of the DOE national laboratories or national user facilities. Baker had worked with the JGI through a …
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JGI Early Career Researchers Featured in mSystems Special Issue
… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more targeted … method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort … a recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach …
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Tina Clarke
… in an HR advisory role to Division/Area management and supervisors to recommend solutions and appropriate actions … to enabling conflict resolution with respect and trust. Ms. Clarke is very enthusiastic to be a part of the … Resolution Services Program and supporting a healthy organizational culture.   …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … hold clues to how humans could do the same on an industrial scale to produce biofuels . Since one of the … expanded into three other universities. You can learn more about how JGI data supports higher education in this JGIota …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National Lab is home to two … that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… achievements in science, technology, and diversity/inclusion by the annual  HPCwire Readers’ and Editors’ Choice … JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire Editors Choice Award for Best Use of HPC in Life Sciences went to the Berkeley Lab team …
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JGI Workshop at SIMB NP Meeting
… these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of cloning and … that address these issues. Check the scientific program for relevant posters. …
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