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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … the JGI hackathon is particularly focused on developing bioinformatics applications instead of on simulation codes. …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … of rumen microbes. In 2018, through a JGI Community Science Program proposal that started six years earlier, researchers …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search for and find 13 … do so, they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for … sequences. Roux was first author on a study featuring a new program called iPHoP , which combines and evaluates multiple …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … of sorghum begins. Enabled by the JGI’s Community Science Program, Todd Mockler and his team collect diverse lines of … have also been sequenced, and the EPICON studies are still informing work on sorghum’s drought tolerance.     … Sorghum …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following …
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Evolution of a Fungal Gene Expression Regulator
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering the true … across 528 species. The researchers found that unlike most flowering plants and animals, fungi lack gene body … Resource Center (GACRC) and Georgia Genomics and Bioinformatics Core (GGBC) at the University of Georgia …
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Taking Stock of the Known and Unknown Microbial Space
… to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … playing key roles in regulating global nutrient cycles. The information gained from understanding the interactions …
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Doubling Down on Known Protein Families
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … genes were typically discarded from any analysis as useless information. These represent the ‘unknown unknowns’ because … “In this endeavor, we have not only ventured into the uncharted territory of understanding the vast landscape of …
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