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IMA genome-F18
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The Surprising Structure of a Shrub Willow Sex Chromosome
… mechanisms of sex determination could also lead to new approaches to accelerate flowering, which can speed the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the sequences. The variety of palindromes observed in nature — for example, in humans Y chromosomes and some …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the journal … how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based …
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Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic … a DOE Office of Science User Facility, compared the genomes of two strains of fungi Serpula lacrymans – var. … from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans …
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Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae
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Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … trees are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree …
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Rex Malmstrom
… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and …
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Team Science Reveals Important Protein in Poplar
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Laboratory (Berkeley Lab). because of its utility for biotechnology and bioenergy applications. Poplars grow … Partly enabled by the JGI  Community Science Program New Investigator program , BNL scientists focused on the …
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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