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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … order to do so is a resource-intensive process. Now, a new study shows how anaerobic fungi — the kind living in the … component for the plant, like the brick-and-mortar of a building or the human skeleton. It’s more complex, and …
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A Grass Model to Help Improve Giant Miscanthus
… chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … history and perennial lifecycle makes it important to study directly. The large and complex genome of M. sinensis … the winter and grows anew the following spring without requiring replanting. Miscanthus is especially efficient at …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … given sigma factor are inferred. Prior to this most recent study, only 12 sigma factors and 200 genes (or 209 sigma …
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Adaptations to marine versus terrestrial low temperature environments as revealed by comparative genomic analyses of the genus Psychrobacter
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Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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Tracking the Origins of Methane-Producing Microbes
Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total … methylotrophic; and, acetoclastic. All three pathways require the gene cluster for methane production known as Mcr. … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … and metabolism, work on which she will expand with her study of microbes in California’s manmade water transport … biology and microbial ecology will allow me to acquire vital skills and expertise, as well as gain invaluable …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … plants, such as candidate  bioenergy feedstock crops, to acquire nutrients. Additionally, these results validate how … (Berkeley Lab). All of the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis … Q: Can you give us an idea about the scale of an average study? How many samples are typically involved? How long … Typically soils that have a high clay content are not well suited for metabolomics because metabolites are strongly …
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Intersubunit Coupling Enables Fast CO2‑Fixation by Reductive Carboxylases
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CO2-converting enzymes for sustainable biotechnology: from mechanisms to application
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