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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … ultimately aims to develop an artificial photosynthesis pathway that would more efficiently remove carbon from the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … Hour mentioned that she had gained knowledge in bioinformatics and machine learning. “Also,” she added, ”I’ve developed efficient skills in working with high performance computing and had an amazing opportunity to …
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How Filamentous Fungi Sense Food
… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the filamentous fungus  Neurospora crassa, and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome … students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert …
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Overview of the Genomes OnLine Database (GOLD)
… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata …
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Defining a Pan-Genome for Antarctic Archaea
… cycles, and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme … applications. The work has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his … sized pieces.  Interestingly, much of the strain variation appeared related to defense against viruses. Experiments …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine microbial … it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … also help  prevent flowering, which would enhance the biosafety of genetically engineered trees. Summary The shrub … and songbird species, the system in shrub willow is flipped: females are heterogametic. To avoid confusion with the …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a … don’t engage in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … cells. The most conserved region in the SPEARE proteins appears to be involved in DNA degradation, and these proteins …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … This type of enrichment could be applied in a number of ways including gathering a more complete view of a …
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Extracting the Secrets of Secondary Metabolites
… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … be activated in lab environments. CRAGE made some headway in overcoming this obstacle when it hit the scene in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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