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… understanding of plant diversity and integrating various data types to explore the molecular mechanisms behind … the Plant Program is advancing research into plant-microbiome interactions, focusing on how environmental … to experimental manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …

… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …

… of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team … S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a …

… bacterial clades shared between honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and … it might make sense that honey bees have a more efficient microbiome to harvest all the energy they can. The results …

… infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the …

… and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …

… find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy Schmutz , head of the  … is direct evidence of climatic adaptation. The team’s database of genes that underlie adaptation to climate …

… quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four  B. … . … Brachypodium distachyon on Phytozome Data Portal …

… to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as … is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio … seven more groups joined the project to contribute to the data for six new species. I must mention that some of the …

… and combining the information with previously published datasets. The work was  recently published in the journal  … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still … Strategic Plan. The present paper provides a foundational data set that is now available through a new  single-cell …

Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … to develop guidelines and best practices for defining virus data quality. Reported in Nature Biotechnology, the work … source, methods of identification of the virus genome, and data quality. Go here to learn more about the project. …