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… (Director), Michael Brandt (Operations Deputy), Horst Simon (Science Deputy), Jeff Blair (Chief Laboratory … you did that with tremendous grace under pressure.” Horst Simon touched upon the overheated server room and subsequent …

… nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying … diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays). Scientific Reports. 2021. …

… and metabolic potential of the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our understanding of the unique …

… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than single cells or …

… of their well-designed sampling and analysis of their data at the time. Following the publication of their paper … Canada at Summerland BC aimed to generate whole genome data of Olpidium. This required an enormous amount of effort … bacteria. Back in 2011 when these genome and transcriptome data were generated, bioinformatic tools for binning …

… published January 27, is about engineering plants and their microbiomes for more sustainable agriculture and was written … the research field’s move toward characterizing the human microbiome  by its genomes and metagenome , rather than just … metabolism . And postdoctoral researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program …

… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies of … structures within cells. This is the largest dataset of its kind ever assembled. The team identified 15 …

… training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The … through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study and compare for the … write a scientific paper. They wrote, edited, and rewrote a microbiome announcement that has been submitted to the …

… of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in … Datasets …

… his team then linked those species-level observations with data on microalgal communities across different ocean … from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing … The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly available at the …

… by a fellowship to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. … 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina and other …