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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a … JGI supports, include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … reference sequence of the complex switchgrass  genome using samples collected at these gardens. Building off this work, …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … for its performance, and then applied it to environmental samples from the Great Boiling Spring Geothermal Field in … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … single amplified genomes of Margulisbacteria from marine samples. The research teams opted to collaborate on a single …
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VEGA Symposium
… – $250 Students & Postdocs – $200 Regular Rates (begin September 19, 2026) General & Berkeley Lab Attendee – … campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” … uncultivated viral diversity, understand the role of viruses in natural ecosystems, and functionally explore …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … and then extrapolating data obtained from environmental samples — to identify over 27,000 microbial genes. These … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, …
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