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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get …
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Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species
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Enlarging Windows into Understanding Gene Functions
… through multiDAP, which allows researchers to conduct comparative analyses across the genomes of multiple species in a single experiment. “Effectively, you can identify conserved … could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the main source of …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … that completely depends on the context and oftentimes a single molecule can be what I like to call … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples
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Cell-free prototyping enables implementation of optimized reverse β-oxidation pathways in heterotrophic and autotrophic bacteria
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Proteome reallocation enables the selective de novo biosynthesis of non-linear, branched-chain acetate esters
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … who encounter an elephant for the first time. Based on the single body part each blind man touches – a tusk, the ear, …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild … Center (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea
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Comparative genomics of pyrophilous fungi reveals a link between fire events and developmental genes
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