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Glacier-preserved Tibetan Plateau viral community probably linked to warm–cold climate variations
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Thermal Stress Has Minimal Effects on Bacterial Communities of Thermotolerant Symbiodinium Cultures
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Transitions of foliar mycobiota community and transcriptome in response to pathogenic conifer needle interactions
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Insights into the bacterial community and its temporal succession during the fermentation of wine grapes
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Community composition and seasonal changes of archaea in coarse and fine air particulate matter
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Accelerating Metagenomics Discoveries with Deep Learning
… of these algorithms, inspired by communication networks found in nature, allows machines to “learn” features. State … sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … to inform the engineering of stable, synthetic microbial communities to take advantage of their joint metabolisms. …
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Crysten Blaby-Haas
Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and knowledge-based user … AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev Micro 22, 63. Davidi L, … Google Scholar … Education … Awards and Service … Selected Publications …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.   … between a plant’s root cells. The fungus is almost always found among and within poplar trees, and in an effort to … is managed by UT-Battelle, LLC, under contract DE-AC05-00OR22725 for the DOE. The work conducted by the DOE Joint …
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Insight into the Bacterial Endophytic Communities of Peach Cultivars Related to Crown Gall Disease Resistance.
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Differences in crop bacterial community structure between hoatzins from different geographical locations
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Substrate perturbation alters the glycoside hydrolase activities and community composition of switchgrass‐adapted bacterial consortia
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