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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy … The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … M. sinensis and a tetraploid M. sacchariflorus , another species of Miscanthus that was sequenced. Understanding the …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused … his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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JGI on the 2020 Highly Cited Researchers List
Congratulations to the 2020 Highly Cited Researchers at the JGI! … highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 … to identify a gene related to seed dispersal in wild populations for the first time. I-Min Chen ,  Natalia …
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Simon Roux
… link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … Nature Biotechnology 37, 29–37. Berg et al., 2021. Host population diversity as a driver of viral infection cycle in … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components … to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … data, gathered using magnetic fields to diagnose electronic structure and functionality on the atomic level, was …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … also identified a gene related to seed dispersal in wild populations for the first time. A 2020 Nature Genetics paper …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after … The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … harbored fungal genomes, including a novel Leotiomycetes species and Coniochaeata lignaria , and both DNA and RNA …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … planet’s resources are being stretched by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted several UC … Theo Loreaux and mentors Simon Roux and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of …
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