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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a … When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take the …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover … specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment …
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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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Metagenomes from Arctic Soil Microbial Communities from the Barrow Environmental Observatory, Utqiaġvik, AK, USA
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Whisperings from not so silent mutations
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from … highlighting the fact that the genetic information in a single reference genome is insufficient. “We really have to …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the University of California, Riverside and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … The technology expresses the transcription factor proteins from a DNA template amplified directly from either genomic … between genomes of different species. This can provide insights into how they orchestrate sets of genes to execute …
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