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JGI@25: The Little Alga That Could
… notable achievements that showcase our collaborations and capabilities to enable great science that will help solve … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … on green algae. “The Chlamy genome launched over a dozen of new Chlamydomonas genome-related Community Science Program …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics … functions allows researchers to use them for engineering applications in support of advancing the bioeconomy.  This … to reveal metabolic pathways that could ultimately enable new or more efficient biotechnologies.  Below find a list of …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance … a DOE Office of Science user facility, aims to explore applications in the life sciences that can be ported to the … assistance from mentors and a team to port their code to a new architecture. Proposals are due March 1, 2019 for the …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… (Berkeley Lab) marked the visit of an esteemed interdisciplinary delegation from the University of Duisburg-Essen … of the Microbial Genomics Program, is enthusiastic about new collaborative projects: “We are excited to continue our … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the … workshops, data carpentry hackathons, and also made new friends while working on their summer projects. Watch … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, …
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JGI@25: From Life at the Extremes to Editing Genomes
… notable achievements that showcase our collaborations and capabilities to enable great science that will help solve … Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics … on guide RNA library generation and development and its applications. “I moved to UC Davis in 2014,” recalled … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant species … breeders aren’t interested in waiting decades to develop new crops. One example is an ongoing collaborative effort to … database of genes that underlie adaptation to climate provides breeders with a strong foundation to improve crop …
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Finding the Fermenters
… data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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Accelerating Metagenomics Discoveries with Deep Learning
… (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to … chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant Pandey of CRD). The … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Extremely thermostable esterases from the thermoacidophilic euryarchaeon Picrophilus torridus
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