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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … larger organisms such as whales, penguins, and seals. “The biomass of krill at least equals the biomass of all humans …
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size … establishing a professional presence through getting credit for any scientific contribution they make, whether as part …
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish the data sets the trees are … again how did you pick genomes to be on the genomes portal? For the taxa I work on, there are 7 genomes on NCBI but your …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy or biofuels. …
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MAGI: A Method for Metabolite Annotation and Gene Integration
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Siderophores and secondary metabolites produced by Ganoderma adspersum
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism
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The Genome Sequence of Methanohalophilus mahii SLPT Reveals Differences in the Energy Metabolism among Members of the Methanosarcinaceae Inhabiting Freshwater and Saline Environments
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Accelerating Metagenomics Discoveries with Deep Learning
… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … García Martin of Berkeley Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD …
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