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The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion
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Thousands of small, novel genes predicted in global phage genomes
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Triggering Morel Fruiting
Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … decomposition by the black morel, as well as the gene-expression programs encoding the biochemical processes … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. …
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Dan Rokhsar
… efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful … the Physics Department and in 2002 he became a Professor of Genetics, Genomics and Development after his research … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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An integrated workflow for phenazine-modifying enzyme characterization
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how … to white rot fungi. Additionally, some of the saprotrophic genes found in the mycorrhizal species, such as nutrient …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers … Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, …
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family Discinaceae (Pezizales, Ascomycota)
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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)
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Integrative genomic mining for enzyme function to enable engineering of a non-natural biosynthetic pathway
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