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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an … community brings together the data resources enabled by the DOE Biological and Environmental Research (BER) … prokaryotes, including two bacteria isolated by their lab. KBase was used to rapidly assemble and …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … into how the multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the … programs. The team also sequenced genomes of numerous wild Miscanthus lineages to better understand the genetic …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … past decade in gene regulatory network projects supported by the CSP, and as part of microbiome research involving the … those found in association with both domesticated and wild animal and plant hosts. One main focus of his service …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA … B.Sc. (HONS) – University of Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial … from Chlamydomonas reinhardtii reveals continuous cell and metabolic differentiation. The Plant Cell . 27: 10, …
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First Monoploid Reference Sequence of Sugarcane
… and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … approach that focused on the gene rich part of the genome by harnessing information from a sequenced related species – … using molecular biology techniques has been hampered by the crop’s highly polyploid genome, which makes …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have … perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two complete genomes from varieties that … and severe flooding. With an ever-increasing global population, drought is an obstacle toward improving crop …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies … could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the main source of …
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10 From JGI on the 2019 Highly Cited Researchers List
… their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused … the Methodology section as “those that rank in the top 1% by citations for papers published and cited between … Genomics Lead Dan Rokhsar , Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal …
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A High-Quality Genome Resource for the Oak Wilt Pathogen Bretziella fagacearum
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