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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … Olpidium zoospores remained largely untouched until seven years later. In 2018, as members of the ZyGoLife consortium …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint … where he leads three groups focused on HTP DNA design and assembly, strain engineering and bioinformatic tool … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the … and also do some computational analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and … worked with Zhong Wang while Karen Tolentino worked with Brachypodium researcher John Vogel. Other students hosted …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… in many regions due to more extreme weather events such as heat waves, droughts and floods. The planet’s resources … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … impact the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare … reinforces the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare … reinforces the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … inform on how this can be done” Roux said. And in just 6 years, IMG/VR has built a foundation for finding more of …
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Learning to Look
Machine learning approach significantly expands inovirus … spotted with a striped scarf, striped hat, round-rimmed glasses, or a cane, but only Waldo will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing resources, an upcoming … sure our computational workload can leverage future HPC systems – our data and compute challenges aren’t getting any …
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