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A Powerful Technique to Study Microbes, Now Easier
… with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots have made these …
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Boosting Small Molecule Production in Super “Soup”
… expression through genetic rewiring with CRISPR-Cas9 that enhanced their ability to redirect the carbon in the cells … able to make the same amount of a product in just eight hours that growing cells take three days to make, which is a … the small molecules glycerol and itaconic acid to see how the cell-free system allowed them to increase the …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes …
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JGI@25: The Little Alga That Could
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria … byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of multicellular …
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Introducing New Members of the JGI User Executive Committee
… but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they inadvertently … that she would like to help advance JGI efforts aimed at “understanding complex communities and symbioses relevant to … for three additional positions on the UEC. Thirty-four JGI users were nominated, representing a breadth of …
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Behind the Paper: Hot Springs Metagenomics
Adapting the graduate research experience amidst a global …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers … zofingiensis . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … recently published paper with first author Amundson in the journal Microbiome . The work builds off a proposal approved …
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Creating an Energy Market for Miscanthus
… plant? Meet Miscanthus , an attractive addition to your garden and a potential fuel for the future. But, to be competitive in the market, both energy policy and Miscanthus will need … upgrades. In this episode, hear from scientists working on understanding Miscanthus biology and the economic terrain to …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science …
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