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The Secondary Metabolism Collaboratory encourages user … public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

Researchers looked across many organisms to see that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, …

A preview of how large-scale single cell genomics complements metagenomics studies. … In these springs, temperatures can reach as high as 80°C (~190°F), yet microbes thrive here. The communities in this … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

CheckV can help researchers assess virus sequence fragments and data quality. … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … Additionally, CheckV was able to identify just over 17,000 contiguous sequences (contigs) of proviruses flanked …

Harnessing BER-funded data resources, researchers built an … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that fermentative …

Maize produces a family of compounds that protects it against infections … zealexins. Even though scientists have identified at least 15 zealexins, they suspect there are even more to find. … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. …

For the first time, a team analyzes the transcriptomes of a lichen … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and … work was supported by an intramural seed grant (IGSP 2008001) to DA, FL, and FD from the Duke Institute of Genomic …

Research uncovers the genetic foundations that helped plants … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the US National Science Foundation (NSF) CAREER award (DBI-1652164, 1933521), the Nebraska Tobacco Settlement …

Dr. Cole is interested in studying how plants interact with their environment. … … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of …

Meta-omics datasets show that CRISPR-Cas systems determine mutualism … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Allen Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …

High-throughput stable isotope probing helps ID novel interactions between … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National … of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported …

For the first time, a team has comprehensively described host-virus … metagenomic sequencing. A team co-led by Mária Džunková, postdoctoral researcher at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …