Results

Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
Learn more
The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
Learn more
Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
Learn more
The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
Learn more
CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
Learn more
The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
Learn more
Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … automated aspects of a commonly-used process for studying microbial communities, with results published in the  … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial …
Learn more
JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … evolutionary history. Retaining ancestral features of both plant and animal cells, it shares nearly 7,000 genes with …
Learn more
Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. … the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their …
Learn more
Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … AN, et al. Mass Spectrometry for Natural Product Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and … Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in …
Learn more
The trajectory of microbial single-cell sequencing
Learn more
Microbial Ecology in a Changing Climate
Learn more