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Genetic and Functional Diversity Help Explain Pathogenic, Weakly Pathogenic, and Commensal Lifestyles in the Genus Xanthomonas
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At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions
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Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression
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Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater
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Taking Stock of the Known and Unknown Microbial Space
… a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all … cycles. The information gained from understanding the interactions between microbes, hosts, and their environments … the estimated diversity of Bacteria and Archaea With phylogenetic diversity standing in as a representative measure of …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) … study of a particular fungi, researchers identified novel interactions between bacteria and the fungi. The Impact …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Pathogens Shayna Bennett and mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and mentor Bryce Foster, … & Evolution of Self-Catalytic Introns across Earth’s Microbiomes Sonia Vargas and mentors Tomas Tyml and Frederik …
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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Mapping Heat Resistance in Yeasts
… proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can identify genes … tests to find associations between genotype – an organism’s genetic makeup – and phenotype – an organism’s physical … more than 1,000 species of yeasts and they vary in terms of genetics, metabolism and biochemistry. Their capabilities …
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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