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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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Metagenomes from Experimental Hydrologic Manipulation of Restored Coastal Plain Wetland Soils (Tyrell County, North Carolina)
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Disclaimer
… NOTICE Information from this server resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by … a particular purpose, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in … metal corrosion in oil pipes. Scientists have tried to study cyclic di-GMP and cellular networks with fluorescent …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of … encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint … Lab). And one of the tools that researchers can apply to study the transcription factors that control how genes are …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Tracing the Evolution of Shiitake Mushrooms
… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same … genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new … the family tree for Lentinula. Within those samples, this study also tracks the enzymes these fungi use to break down …
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A Model System for Perennial Grasses
… hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in perennial grasses using Panicum … complete genomes from varieties that diverged over a million years ago. The hallii variety thrives in desert …
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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