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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for … Communication Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior …
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Introducing New Members of the JGI User Executive Committee
… “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here to … to technical capabilities JGI offers, as well as proposal review procedures and the organization of the JGI Annual …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … automated aspects of a commonly-used process for studying microbial communities, with results published in … with potential applications in industry and biotechnology for the production of  clean energy . Summary …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for … reach out to any of them with questions. Q:  Apart from instrumental support, how much help can users expect for data …
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UC Merced Interns Reflect on Their JGI Summer Projects
… develop presentation skills as well as build their network in the field of genomics and scientific research. The topics … students worked on ranged far and wide — from implementing new data visualization tools, to using natural language … due to COVID-19 restrictions, but virtual events and technology enabled a fruitful experience for mentors and …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly … which metabolites. … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… to extreme environments, Marike Palmer and Brian Hedlund study organisms living in hot springs. Hear how their recent work revealed more …
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How Microbes Can Protect Plants in Drier Straits
A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI …
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Marianne Buscaglia
Marianne is an affiliate researcher who uses metagenomics to study giant viruses in cold marine environments and is interested in analyzing genes that …
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Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber
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Tomas Tyml
… cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary …
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Cultivating Symbiotic Antarctic Microbes
… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … The researchers then pursued the Nha-C strain for further study, tagging the cells with individual fluorescent probes. …
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