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Sphagnome data would enable researchers’ insights on their … as “an unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and … to predicting the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high …

JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest … leverage novel capabilities of IMG/VR to browse and search through the more than 2 million viral sequences available in …

CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a …

Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … RNA virus sequences. Using this workflow, the team combed through more than 5,000 data sets of RNA sequences …

Every year, the JGI sequences around 35,000 samples — from plants, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are …

As set out in the JGI Five-Year Strategic Plan – “Beyond … Vision for Integrative and  Collaborative Genome Science” – through early introduction to the resources and disciplines … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …

Nanohaloarchaeota cultures reveal they are symbionts and not … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, …

New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … use of those other two components, which requires getting through the lignin.  Researchers led by Michelle O’Malley’s …

In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … and mouse triglyceride metabolism. He is funded by DOE and through continued competitive grant support from NIH. … BA …

Chloroplast mimic a platform to capture and utilize carbon in a … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … dioxide in the atmosphere. The work was enabled in part through the Community Science Program (CSP) of the U.S. …

Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … to stresses. A total of 17 proposals have been approved through the annual Community Science Program (CSP) call of …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … of these systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State …