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BiG-SCAPE 2.0 and BiG-SLiCE 2.0: scalable, accurate and interactive sequence clustering of metabolic gene clusters
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Cytochrome P450‐catalyzed biosynthesis of furanoditerpenoids in the bioenergy crop switchgrass (Panicum virgatum L.)
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Complete Genome Sequence of the Complex Carbohydrate-Degrading Marine Bacterium, Saccharophagus degradans Strain 2-40T
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … everywhere, comparatively little is known about viruses, much less those considered large and giant. In a recent … the researchers insights into how they might interact with their hosts, and how those interactions may in turn impact …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  … searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single snowflake on a … information is encoded in DNA, with RNA delivering the instructions inside DNA to the cell, RNA viruses store their …
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Triphenyltin degradation and proteomic response by an engineered Escherichia coli expressing cytochrome P450 enzyme
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A multifunctional sesquiterpene synthase integrates with cytochrome P450s to reinforce the terpenoid defense network in maize
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… teaches the A-Level Advanced International Certificate of Education (AICE) Biology class at Boca Raton Community High … own high school biology teacher, who helped connect me with internships and training at the Clorox Company and Lawrence … high school in a few months, Benskin shared his own reflections on the experience. “’Doing science’ is something …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist … by the U.S. Department of Energy Office of Science under Contract No. DE-AC02-05CH11231 …
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Sharing Structure and Function in Biological Design with SBOL 2.0
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with … this to untangle which microbes ate the compound and how much they ate.  These analyses provide granular insight into … set up a broad experiment to compare results between labs. Their labs, as well as Pett-Ridge’s group, will assemble …
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