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Natural Prodcast Episode 5: Brad Moore
… marine natural products chemist, Richard Moore, and get into seaweed, robots, algae, and biocatalysis — and he makes … him? I know a lot of people sort of veer off and go into different directions. Brad: Absolutely. You know, my … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let us know!  …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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Training the Next Generation of Talent
… that contains transcribed instructions for building and maintaining cells through the use of deep-sequencing … areas the JGI is interested in. JGI would like to tap into that talent pool. At the same time, this program … JGI and UC Merced.” Sindi thinks the internship program offers a number of benefits to UC Merced graduate students. …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which … peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat …
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Gene Expression: From On-Off Switch to Dial
Proceedings of the National Academy of Sciences (PNAS), offers more ways for scientists to explore the balance of … in multiple applications. This proof-of-concept experiment offers a new approach for fine-tuning gene expression in …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose debris, mobilize … that decay, and deliver those nutrients to tree roots and soil. These fungi help shape a forest’s ecology. They store … found in soil samples, and assembled those RNA transcripts into a metatranscriptome. Overall, they found that despite …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Meta-omics survey of [NiFe]-hydrogenase genes fails to capture drastic variations in H2-oxidation activity measured in three soils exposed to H2
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Doubling Down on Known Protein Families
… ‘Dark Matter’ Microbial communities living everywhere from soils and stomachs to the deep sea are capable of doing a … we have amassed an extensive repository of groundbreaking insights, significantly expanding the horizons of potential … majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences evaded …
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