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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as … Jill Banfield approached Doudna with repeated genetic sequences (already known as CRISPR) that came up in her … this background, which focuses on cell biology and how the structure and function of chromosomes relate to inherited …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The … Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing … This work was partially supported by awards from US Department of …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology … noticed that a large percentage of Phytozome users who were seeking to download all the data associated with the latest … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and … The JGI Advisory Committee (JAC) is convened by the JGI Director to …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … program . Her research project, “Microbial Community Structure and Methane Production in California’s Canal … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data … Proposers are encouraged to review the JGI’s sample …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene … a couple rounds of edits, and collaborating with  Nature ’s cartoonists, the article comes out — about two months after …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  …
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JGI-USCCN Strain Sequencing Opportunity
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … a census of publicly available bacterial and archaeal sequences. Kyrpides heads the JGI’s Microbiome Data Science … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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