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… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … of archaea called  Euryarchaeota . These ancient, single-celled organisms thrive in most  environments devoid of … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … comparable data with useful and accessible metadata multiplies these possibilities, and maximizes returns from … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …

Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… organisms survive hotter, drier climates. So University of Tuscia researchers Laura Selbmann and Claudia Coleine are …

… into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … enzymes in specialized metabolism, organisms tend to evolve multiple copies of enzymes, similar to including half a … plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified …

… data gathered from whole samples rather than single cells or isolated strains, is easy to generate, but … two vectors,” said Sevim.  While there are alignment-free methods for nucleotide searches, such as  Mash and  … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … time course data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … in the Green Alga Chromochloris zofingiensis. Plant Cell. 2019;31: 579–601. 5. Erbilgin O, Rübel O, Louie KB, … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …